Transcript: lnc-ID4-2:1

Basic information

LNCipedia transcript ID: lnc-ID4-2:1 
LNCipedia gene ID: lnc-ID4-2
Location (hg19): chr6:19538728-19539166
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 300 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011714; NONHSAT107997
Alternative gene names: XLOC_005192; linc-ID4-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -257.3263 non-coding 
CPAT coding probability 5.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ID4-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ID4-2:1
3.1 lnc-ID4-2:1
4.0 lnc-ID4-2:1
4.1 lnc-ID4-2:1
5.0 lnc-ID4-2:1
5.1 lnc-GMNN-40:2
5.2 lnc-ID4-2:1