Transcript: lnc-IER3-15:9
Basic information
LNCipedia transcript ID: lnc-IER3-15:9
HGNC Gene Symbol: lnc-IER3-15
HGNC Full Gene Name:
long intergenic non-protein coding RNA 243
Ensembl Gene ID:
ENSG00000214894
Ensembl Transcript ID:
ENST00000399196
RefSeq ID:
NR_130726
Location (hg19): chr6:30780643-30798436
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2052 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000399196; ENST00000399196.1; LINC00243-001; OTTHUMT00000076501.3; NONHSAT108682; NR_130726.1
Alternative gene names: ENSG00000214894; NCRNA00243; ENSG00000214894.2; LINC00243; OTTHUMG00000031239.3; ENSG00000214894.6; bQB230F21.2; FLJ40693; bQB10J12.2
RNA sequence:
Structure:
Protein coding potential
In stringent set: no
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| lnc-IER3-15:9 | no | no | no | no |
Available literature
- Ning (2014), LincSNP: a database of linking disease-associated SNPs to human large intergenic non-coding RNAs., BMC Bioinformatics
- Horton (2008), Variation analysis and gene annotation of eight MHC haplotypes: the MHC Haplotype Project., Immunogenetics
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 1.3 | lnc-IER3-1:1 |
| 3.1 | lnc-IER3-5:2 |
| 4.0 | LINC00243:1 |
| 4.1 | LINC00243:1 |
| 5.0 | LINC00243:1 |
| 5.1 | lnc-SFTA2-15:9 |
| 5.2 | lnc-IER3-15:9 |