Transcript: lnc-IFNA4-2:1

Basic information

LNCipedia transcript ID: lnc-IFNA4-2:1 
LNCipedia gene ID: lnc-IFNA4-2
Location (hg19): chr9:21178588-21179187
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 600 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT130372
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 68.9423 coding 
CPAT coding probability 27.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IFNA4-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IFNA4-2:1
4.0 lnc-IFNA4-2:1
4.1 lnc-IFNA4-2:1
5.0 lnc-IFNA4-2:1
5.1 lnc-FREM1-40:1
5.2 lnc-IFNA4-2:1