Transcript: lnc-IFNK-1:2

Basic information

LNCipedia transcript ID: lnc-IFNK-1:2 
LNCipedia gene ID: lnc-IFNK-1
Ensembl Gene ID: ENSG00000285103
Ensembl Transcript ID: ENST00000645861
Location (hg19): chr9:27529917-27543900
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8600 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000645861.1
Alternative gene names: ENSG00000285103.1; AL451123.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -21.3318 non-coding 
CPAT coding probability 1.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IFNK-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-RECK-97:2
5.1 lnc-RECK-97:2
5.2 lnc-IFNK-1:2