Transcript: lnc-IFT46-1:14

Basic information

LNCipedia transcript ID: lnc-IFT46-1:14 
LNCipedia gene ID: lnc-IFT46-1
Location (hg19): chr11:118390331-118401856
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 281 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255435.2|ENST00000556583.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -175.1684 non-coding 
CPAT coding probability 4.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IFT46-1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IFT46-1:14
5.0 lnc-IFT46-1:14
5.1 lnc-SCN4B-23:7
5.2 lnc-IFT46-1:14