Transcript: lnc-IFT46-1:25

Basic information

LNCipedia transcript ID: lnc-IFT46-1:25 
LNCipedia gene ID: lnc-IFT46-1
RefSeq ID: NR_120572
Location (hg19): chr11:118390100-118401490
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 740 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120572.1
Alternative gene names: LOC101929089


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.4173 non-coding 
CPAT coding probability 2.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IFT46-1:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SCN4B-23:19
5.1 lnc-SCN4B-23:19
5.2 lnc-IFT46-1:25