Transcript: lnc-IFT80-4:5

Basic information

LNCipedia transcript ID: lnc-IFT80-4:5 
LNCipedia gene ID: lnc-IFT80-4
Location (hg19): chr3:160075273-160117011
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 657 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT092981
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1666.4164 coding 
CPAT coding probability 44.58% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IFT80-4:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM59-4:5
4.0 lnc-IFT80-4:5
4.1 lnc-IFT80-4:5
5.0 lnc-IFT80-4:5
5.1 lnc-TRIM59-4:14
5.2 lnc-IFT80-4:5