Transcript: lnc-IFT80-4:6

Basic information

LNCipedia transcript ID: lnc-IFT80-4:6 
LNCipedia gene ID: lnc-IFT80-4
Location (hg19): chr3:160037621-160117009
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 591 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT092979
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 56.3056 non-coding 
CPAT coding probability 11.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IFT80-4:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM59-4:6
4.0 lnc-IFT80-4:6
4.1 lnc-IFT80-4:6
5.0 lnc-IFT80-4:6
5.1 lnc-TRIM59-4:15
5.2 lnc-IFT80-4:6