Transcript: lnc-IFT80-5:1

Basic information

LNCipedia transcript ID: lnc-IFT80-5:1 
LNCipedia gene ID: lnc-IFT80-5
Location (hg19): chr3:159728598-159728808
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 211 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucExp_134_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.156 non-coding 
CPAT coding probability 4.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IFT80-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-432B6.3.1-4:1
4.0 lnc-RP11-432B6.3.1-4:1
4.1 lnc-RP11-432B6.3.1-4:1
5.0 lnc-RP11-432B6.3.1-4:1
5.1 lnc-TRIM59-7:1
5.2 lnc-IFT80-5:1