Transcript: lnc-IFT80-8:1

Basic information

LNCipedia transcript ID: lnc-IFT80-8:1 
LNCipedia gene ID: lnc-IFT80-8
Location (hg19): chr3:159471999-159481681
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 9683 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000241211.1|ENCT00000310784.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.7046 non-coding 
CPAT coding probability 11.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IFT80-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 IQCJ-SCHIP1-AS1:5
5.0 IQCJ-SCHIP1-AS1:5
5.1 lnc-TRIM59-10:1
5.2 lnc-IFT80-8:1