Transcript: lnc-IFT80-8:2

Basic information

LNCipedia transcript ID: lnc-IFT80-8:2 
LNCipedia gene ID: lnc-IFT80-8
Location (hg19): chr3:159472734-159472940
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 207 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: uc_131_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IFT80-8:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-432B6.3.1-7:1
4.0 lnc-RP11-432B6.3.1-7:1
4.1 IQCJ-SCHIP1-AS1:15
5.0 IQCJ-SCHIP1-AS1:15
5.1 lnc-TRIM59-10:2
5.2 lnc-IFT80-8:2