Transcript: lnc-IGFBP1-6:1

Basic information

LNCipedia transcript ID: lnc-IGFBP1-6:1 
LNCipedia gene ID: lnc-IGFBP1-6
Location (hg19): chr7:46385371-46389981
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 251 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013438; NONHSAT120496
Alternative gene names: XLOC_006084; linc-C7orf65-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.3753 non-coding 
CPAT coding probability 4.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGFBP1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IGFBP1-6:1
3.1 lnc-IGFBP1-6:1
4.0 lnc-IGFBP1-6:1
4.1 lnc-IGFBP1-6:1
5.0 lnc-IGFBP1-6:1
5.1 lnc-CCT6A-108:1
5.2 lnc-IGFBP1-6:1