Transcript: lnc-IGFBP7-6:2

Basic information

LNCipedia transcript ID: lnc-IGFBP7-6:2 
LNCipedia gene ID: lnc-IGFBP7-6
Location (hg19): chr4:59912738-59940960
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 291 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00007770
Alternative gene names: XLOC_003963; linc-IGFBP7-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.681 non-coding 
CPAT coding probability 5.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGFBP7-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IGFBP7-5:2
3.1 lnc-IGFBP7-6:2
4.0 lnc-IGFBP7-6:2
4.1 lnc-IGFBP7-6:2
5.0 lnc-IGFBP7-6:2
5.1 lnc-CENPC-67:2
5.2 lnc-IGFBP7-6:2