Transcript: lnc-IGLL1-1:41

Basic information

LNCipedia transcript ID: lnc-IGLL1-1:41 
LNCipedia gene ID: lnc-IGLL1-1
Location (hg19): chr22:24002053-24032591
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 451 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000608454.1
Alternative gene names: ENSG00000228315.7; GUSBP11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.469 non-coding 
CPAT coding probability 82.64% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IGLL1-1:41 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C22orf43-1:32
4.0 lnc-C22orf43-1:32
4.1 lnc-IGLL1-1:41
5.0 lnc-IGLL1-1:41
5.1 lnc-SCARF2-65:40
5.2 lnc-IGLL1-1:41