Transcript: lnc-IGLL1-1:57

Basic information

LNCipedia transcript ID: lnc-IGLL1-1:57 
LNCipedia gene ID: lnc-IGLL1-1
Ensembl Gene ID: ENSG00000211683
Ensembl Transcript ID: ENST00000390329
Location (hg19): chr22:23972805-23981128
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1087 bp
Exons: 6
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000390329.3
Alternative gene names: ENSG00000211683.3; KB-1572G7.3; AP000346.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.8277 non-coding 
CPAT coding probability 7.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGLL1-1:57 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C22orf43-1:47
4.0 lnc-C22orf43-1:47
4.1 lnc-IGLL1-1:57
5.0 lnc-IGLL1-1:57
5.1 lnc-SCARF2-65:56
5.2 lnc-IGLL1-1:57