Transcript: lnc-IGSF1-4:1

Basic information

LNCipedia transcript ID: lnc-IGSF1-4:1 
LNCipedia gene ID: lnc-IGSF1-4
Location (hg19): chrX:130710975-130717452
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 339 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3966_chrX:130710974-130717452_hela
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -268.7448 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGSF1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IGSF1-4:1
4.0 lnc-IGSF1-4:1
4.1 lnc-IGSF1-4:1
5.0 lnc-IGSF1-4:1
5.1 lnc-HS6ST2-11:1
5.2 lnc-IGSF1-4:1