Transcript: lnc-IGSF10-11:1

Basic information

LNCipedia transcript ID: lnc-IGSF10-11:1 
LNCipedia gene ID: lnc-IGSF10-11
Location (hg19): chr3:152213016-152214800
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 693 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT092757; FPKM1_group_22221_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -193.8398 non-coding 
CPAT coding probability 2.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGSF10-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM14E-1:2
4.0 lnc-TMEM14E-1:2
4.1 lnc-TMEM14E-1:2
5.0 lnc-TMEM14E-1:2
5.1 lnc-P2RY13-11:1
5.2 lnc-IGSF10-11:1