Transcript: lnc-IGSF10-11:2

Basic information

LNCipedia transcript ID: lnc-IGSF10-11:2 
LNCipedia gene ID: lnc-IGSF10-11
Ensembl Gene ID: ENSG00000243305
Ensembl Transcript ID: ENST00000463255
Location (hg19): chr3:152175548-152214602
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 474 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000463255.1; RP11-362A9.3-001; OTTHUMT00000356953.1; NONHSAT092754
Alternative gene names: ENSG00000243305.1; RP11-362A9.3; OTTHUMG00000159699.1; AC026347.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.8307 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGSF10-11:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM14E-1:1
4.0 lnc-TMEM14E-1:1
4.1 lnc-TMEM14E-1:1
5.0 lnc-TMEM14E-1:1
5.1 lnc-P2RY13-11:2
5.2 lnc-IGSF10-11:2