Transcript: lnc-IGSF11-5:5

Basic information

LNCipedia transcript ID: lnc-IGSF11-5:5 
LNCipedia gene ID: lnc-IGSF11-5
Location (hg19): chr3:118346601-118529646
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1731 bp
Exons: 11
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000065792.1|MICT00000248814.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.7542 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGSF11-5:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LSAMP-5:8
5.0 lnc-LSAMP-5:8
5.1 lnc-GOLGB1-36:4
5.2 lnc-IGSF11-5:5