Transcript: lnc-IGSF21-67:1

Basic information

LNCipedia transcript ID: lnc-IGSF21-67:1 
LNCipedia gene ID: lnc-IGSF21-67
Ensembl Gene ID: ENSG00000284653
Ensembl Transcript ID: ENST00000641892
Location (hg19): chr1:18342206-18372106
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2013 bp
Exons: 4
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641892.1
Alternative gene names: ENSG00000284653.1; AL357509.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -80.8467 non-coding 
CPAT coding probability 2.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGSF21-67:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SZRD1-67:1
5.1 lnc-SZRD1-67:1
5.2 lnc-IGSF21-67:1