Transcript: lnc-IKBIP-16:4

Basic information

LNCipedia transcript ID: lnc-IKBIP-16:4 
LNCipedia gene ID: lnc-IKBIP-16
Location (hg19): chr12:98107190-98147376
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1641 bp
Exons: 7
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000552582; NONHSAT030107; NR_077241
Alternative gene names: ENSG00000257501; RP11-1016B18.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.094 non-coding 
CPAT coding probability 9.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IKBIP-16:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-181C3.1.1-4:4
3.1 lnc-RP11-181C3.1.1-4:4
4.0 lnc-RP11-181C3.1.1-4:4
4.1 lnc-RP11-181C3.1.1-4:4
5.0 lnc-RP11-181C3.1.1-4:4
5.1 lnc-ANKS1B-21:4
5.2 lnc-IKBIP-16:4