Transcript: lnc-IKZF1-15:2

Basic information

LNCipedia transcript ID: lnc-IKZF1-15:2 
LNCipedia gene ID: lnc-IKZF1-15
Location (hg19): chr7:50518143-50521015
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2840 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000092298.1|ENCT00000399659.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.9714 non-coding 
CPAT coding probability 7.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IKZF1-15:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IKZF1-15:2
5.0 lnc-IKZF1-15:2
5.1 lnc-CCT6A-87:2
5.2 lnc-IKZF1-15:2