Transcript: lnc-IKZF2-3:8

Basic information

LNCipedia transcript ID: lnc-IKZF2-3:8 
LNCipedia gene ID: lnc-IKZF2-3
Location (hg19): chr2:214147400-214148940
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1541 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000196096.3|ENCT00000253303.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.7399 non-coding 
CPAT coding probability 1.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IKZF2-3:8 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IKZF2-3:8
5.0 lnc-IKZF2-3:8
5.1 lnc-FN1-3:13
5.2 lnc-IKZF2-3:8