Transcript: lnc-IL10RA-1:6

Basic information

LNCipedia transcript ID: lnc-IL10RA-1:6 
LNCipedia gene ID: lnc-IL10RA-1
Location (hg19): chr11:117704625-117709522
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 587 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000581173.1; RP11-728F11.4-003; OTTHUMT00000447324.1
Alternative gene names: ENSG00000254528.2; RP11-728F11.4; OTTHUMG00000166522.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 66.33% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IL10RA-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-728F11.4.1-1:3
4.0 lnc-RP11-728F11.4.1-1:3
4.1 lnc-RP11-728F11.4.1-1:3
5.0 lnc-RP11-728F11.4.1-1:3
5.1 lnc-HMBS-40:6
5.2 lnc-IL10RA-1:6