Transcript: lnc-IL10RA-5:1

Basic information

LNCipedia transcript ID: lnc-IL10RA-5:1 
LNCipedia gene ID: lnc-IL10RA-5
Location (hg19): chr11:117686322-117687997
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1462 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000003969.1|MICT00000068148.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -84.7085 non-coding 
CPAT coding probability 6.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL10RA-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-728F11.4.1-5:1
5.0 lnc-RP11-728F11.4.1-5:1
5.1 lnc-HMBS-42:1
5.2 lnc-IL10RA-5:1