Transcript: lnc-IL17RA-4:34

Basic information

LNCipedia transcript ID: lnc-IL17RA-4:34 
LNCipedia gene ID: lnc-IL17RA-4
Location (hg19): chr22:17615907-17616765
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 859 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT083189; FPKM1_group_20254_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.6906 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL17RA-4:34 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC006946.15.1-4:1
4.0 lnc-AC006946.15.1-4:1
4.1 lnc-AC006946.15.1-4:1
5.0 lnc-AC006946.15.1-4:1
5.1 lnc-SERPIND1-76:1
5.2 lnc-IL17RA-4:34