Transcript: lnc-IL1A-4:1

Basic information

LNCipedia transcript ID: lnc-IL1A-4:1 
LNCipedia gene ID: lnc-IL1A-4
Location (hg19): chr2:113552625-113553647
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1023 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000049674.1|FTMT20600007176.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -93.0495 non-coding 
CPAT coding probability 2.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL1A-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IL1A-4:1
5.0 lnc-IL1A-4:1
5.1 lnc-EN1-50:1
5.2 lnc-IL1A-4:1