Transcript: lnc-IL2RA-2:1

Basic information

LNCipedia transcript ID: lnc-IL2RA-2:1 
LNCipedia gene ID: lnc-IL2RA-2
Location (hg19): chr10:6168005-6179520
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 409 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000435526.1; RP11-414H17.6-001; OTTHUMT00000046625.1; NONHSAT011208
Alternative gene names: ENSG00000232547.1; RP11-414H17.6; OTTHUMG00000017614.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -59.9683 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL2RA-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL2RA-2:1
4.0 lnc-IL2RA-2:1
4.1 lnc-IL2RA-2:1
5.0 lnc-IL2RA-2:1
5.1 lnc-KLF6-73:1
5.2 lnc-IL2RA-2:1