Transcript: lnc-IL6-3:10

Basic information

LNCipedia transcript ID: lnc-IL6-3:10 
LNCipedia gene ID: lnc-IL6-3
RefSeq ID: NR_038393
Location (hg19): chr7:22602956-22613617
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2434 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT119469; NR_038393; NR_038393.1
Alternative gene names: LOC100506178


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.6606 non-coding 
CPAT coding probability 3.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL6-3:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL6-3:10
4.0 lnc-IL6-3:10
4.1 lnc-IL6-3:10
5.0 lnc-IL6-3:10
5.1 lnc-SNX10-76:10
5.2 lnc-IL6-3:10