Transcript: lnc-IL6-3:26

Basic information

LNCipedia transcript ID: lnc-IL6-3:26 
LNCipedia gene ID: lnc-IL6-3
Location (hg19): chr7:22629321-22633368
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4048 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232949.1|MICT00000319834.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.2919 non-coding 
CPAT coding probability 7.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL6-3:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IL6-3:26
5.0 lnc-IL6-3:26
5.1 lnc-SNX10-76:24
5.2 lnc-IL6-3:26