Transcript: lnc-IMMP2L-1:13

Basic information

LNCipedia transcript ID: lnc-IMMP2L-1:13 
LNCipedia gene ID: lnc-IMMP2L-1
Location (hg19): chr7:109748142-109750732
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 269 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT122759; FPKM1_group_30166_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.8312 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IMMP2L-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IMMP2L-6:1
4.0 lnc-IMMP2L-6:1
4.1 lnc-IMMP2L-1:13
5.0 lnc-IMMP2L-1:13
5.1 lnc-NRCAM-34:10
5.2 lnc-IMMP2L-1:13