Transcript: lnc-INAVA-1:7

Basic information

LNCipedia transcript ID: lnc-INAVA-1:7 
LNCipedia gene ID: lnc-INAVA-1
Location (hg19): chr1:200993077-200997920
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3508 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229191.1|ENST00000458003.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -58.4091 non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INAVA-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C1orf106-1:11
5.0 lnc-C1orf106-1:11
5.1 lnc-ADORA1-63:7
5.2 lnc-INAVA-1:7