Transcript: lnc-INAVA-1:8

Basic information

LNCipedia transcript ID: lnc-INAVA-1:8 
LNCipedia gene ID: lnc-INAVA-1
Location (hg19): chr1:200993077-201000110
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5698 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229191.1|ENCT00000016094.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.8163 non-coding 
CPAT coding probability 36.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-INAVA-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C1orf106-1:12
5.0 lnc-C1orf106-1:12
5.1 lnc-ADORA1-63:8
5.2 lnc-INAVA-1:8