Transcript: lnc-INO80C-1:14

Basic information

LNCipedia transcript ID: lnc-INO80C-1:14 
LNCipedia gene ID: lnc-INO80C-1
Location (hg19): chr18:33023831-33047045
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 777 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267583.1|ENCT00000196747.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -36.0059 non-coding 
CPAT coding probability 8.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-INO80C-1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-INO80C-1:14
5.0 lnc-INO80C-1:14
5.1 lnc-SMAD2-92:10
5.2 lnc-INO80C-1:14