Transcript: lnc-IPO5-3:2

Basic information

LNCipedia transcript ID: lnc-IPO5-3:2 
LNCipedia gene ID: lnc-IPO5-3
Location (hg19): chr13:98795434-98865486
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 433 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT034844
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.5072 non-coding 
CPAT coding probability 1.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IPO5-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FARP1-3:1
4.0 lnc-FARP1-3:1
4.1 lnc-FARP1-3:1
5.0 lnc-FARP1-3:1
5.1 lnc-COL4A2-112:1
5.2 lnc-IPO5-3:2