Transcript: lnc-IQGAP3-2:4

Basic information

LNCipedia transcript ID: lnc-IQGAP3-2:4 
LNCipedia gene ID: lnc-IQGAP3-2
Location (hg19): chr1:156435795-156440291
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 540 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001frs_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.8314 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IQGAP3-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf61-2:3
4.0 lnc-IQGAP3-2:4
4.1 lnc-IQGAP3-2:4
5.0 lnc-IQGAP3-2:4
5.1 lnc-PAQR6-10:4
5.2 lnc-IQGAP3-2:4