Transcript: lnc-IRAK1BP1-8:1

Basic information

LNCipedia transcript ID: lnc-IRAK1BP1-8:1 
LNCipedia gene ID: lnc-IRAK1BP1-8
Location (hg19): chr6:79943707-79944183
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 285 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270362.1|FTMT22300042442.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -157.2138 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRAK1BP1-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 HMGN3-AS1:10
5.0 HMGN3-AS1:10
5.1 lnc-CYB5R4-130:1
5.2 lnc-IRAK1BP1-8:1