Transcript: lnc-IRF2BP2-9:2

Basic information

LNCipedia transcript ID: lnc-IRF2BP2-9:2 
LNCipedia gene ID: lnc-IRF2BP2-9
Location (hg19): chr1:234527156-234536962
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 873 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT010280
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -324.9873 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRF2BP2-9:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IRF2BP2-9:2
4.0 lnc-IRF2BP2-9:2
4.1 lnc-IRF2BP2-9:2
5.0 lnc-IRF2BP2-9:2
5.1 lnc-SIPA1L2-29:2
5.2 lnc-IRF2BP2-9:2