Transcript: lnc-ISL1-5:1

Basic information

LNCipedia transcript ID: lnc-ISL1-5:1 
LNCipedia gene ID: lnc-ISL1-5
Location (hg19): chr5:51281812-51283777
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 292 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009958; NONHSAT101399
Alternative gene names: XLOC_004380; linc-PELO-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -237.1141 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ISL1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTD-2203A3.1.1-1:1
3.1 lnc-CTD-2203A3.1.1-1:1
4.0 lnc-CTD-2203A3.1.1-1:1
4.1 lnc-CTD-2203A3.1.1-1:1
5.0 lnc-CTD-2203A3.1.1-1:1
5.1 lnc-GPBP1-57:1
5.2 lnc-ISL1-5:1