Transcript: lnc-ITGB3BP-5:7

Basic information

LNCipedia transcript ID: lnc-ITGB3BP-5:7 
LNCipedia gene ID: lnc-ITGB3BP-5
Location (hg19): chr1:63906471-63923366
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1096 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT003678
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.3545 non-coding 
CPAT coding probability 15.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITGB3BP-5:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB3BP-5:7
4.0 lnc-ITGB3BP-5:7
4.1 lnc-ITGB3BP-5:7
5.0 lnc-ITGB3BP-5:7
5.1 lnc-ITGB3BP-5:7
5.2 lnc-ITGB3BP-5:7