Transcript: lnc-ITGB8-2:14

Basic information

LNCipedia transcript ID: lnc-ITGB8-2:14 
LNCipedia gene ID: lnc-ITGB8-2
Location (hg19): chr7:20257187-20262800
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2267 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233834.2|ENCT00000397365.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -252.4353 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITGB8-2:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ITGB8-2:14
5.0 lnc-ITGB8-2:14
5.1 lnc-AHR-34:8
5.2 lnc-ITGB8-2:14