Transcript: lnc-ITGB8-2:16

Basic information

LNCipedia transcript ID: lnc-ITGB8-2:16 
LNCipedia gene ID: lnc-ITGB8-2
RefSeq ID: NR_134569
Location (hg19): chr7:20257200-20261323
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 686 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134569.1
Alternative gene names: LOC100506098


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -267.7939 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITGB8-2:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-AHR-34:11
5.1 lnc-AHR-34:11
5.2 lnc-ITGB8-2:16