Transcript: lnc-ITM2C-1:10

Basic information

LNCipedia transcript ID: lnc-ITM2C-1:10 
LNCipedia gene ID: lnc-ITM2C-1
Location (hg19): chr2:231751212-231761806
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1814 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232520.1|ENST00000415628.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -112.1426 non-coding 
CPAT coding probability 53.96% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ITM2C-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ITM2C-1:10
5.0 lnc-ITM2C-1:10
5.1 lnc-ARMC9-10:4
5.2 lnc-ITM2C-1:10