Transcript: lnc-ITM2C-1:9

Basic information

LNCipedia transcript ID: lnc-ITM2C-1:9 
LNCipedia gene ID: lnc-ITM2C-1
Location (hg19): chr2:231751212-231760183
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 560 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232520.1|ENST00000447074.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -138.6939 non-coding 
CPAT coding probability 18.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITM2C-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ITM2C-1:9
5.0 lnc-ITM2C-1:9
5.1 lnc-ARMC9-10:3
5.2 lnc-ITM2C-1:9