Transcript: lnc-JADE1-5:1

Basic information

LNCipedia transcript ID: lnc-JADE1-5:1 
LNCipedia gene ID: lnc-JADE1-5
Location (hg19): chr4:129515068-129697105
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2101 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT098278
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.5449 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JADE1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PHF17-5:1
4.0 lnc-PHF17-5:1
4.1 lnc-PHF17-5:1
5.0 lnc-PHF17-5:1
5.1 lnc-ABHD18-11:1
5.2 lnc-JADE1-5:1