Transcript: lnc-JMJD1C-2:2

Basic information

LNCipedia transcript ID: lnc-JMJD1C-2:2 
LNCipedia gene ID: lnc-JMJD1C-2
Location (hg19): chr10:65620253-65647042
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 580 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT013613
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -173.0481 non-coding 
CPAT coding probability 6.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JMJD1C-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-JMJD1C-2:2
4.0 lnc-JMJD1C-2:2
4.1 lnc-JMJD1C-2:2
5.0 lnc-JMJD1C-2:2
5.1 lnc-C10orf105-78:6
5.2 lnc-JMJD1C-2:2