Transcript: lnc-JMJD7-PLA2G4B-11:1

Basic information

LNCipedia transcript ID: lnc-JMJD7-PLA2G4B-11:1 
LNCipedia gene ID: lnc-JMJD7-PLA2G4B-11
Location (hg19): chr15:42264989-42266250
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 461 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000246740.2|FTMT25900021585.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -259.1541 non-coding 
CPAT coding probability 9.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JMJD7-PLA2G4B-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PLA2G4E-AS1:4
5.0 PLA2G4E-AS1:4
5.1 lnc-TMEM62-152:1
5.2 lnc-JMJD7-PLA2G4B-11:1