Transcript: lnc-JRKL-1:2

Basic information

LNCipedia transcript ID: lnc-JRKL-1:2 
LNCipedia gene ID: lnc-JRKL-1
RefSeq ID: NR_135097
Location (hg19): chr11:96241589-96247914
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 406 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135097.1
Alternative gene names: LOC105369443


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -97.0791 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JRKL-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TRIM49C-59:2
5.1 lnc-TRIM49C-59:2
5.2 lnc-JRKL-1:2