Transcript: lnc-JRKL-5:2

Basic information

LNCipedia transcript ID: lnc-JRKL-5:2 
LNCipedia gene ID: lnc-JRKL-5
Location (hg19): chr11:96458797-96459978
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 419 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_5199_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.3208 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-JRKL-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-JRKL-5:2
4.0 lnc-JRKL-5:2
4.1 lnc-JRKL-5:2
5.0 lnc-JRKL-5:2
5.1 lnc-DYNC2H1-37:2
5.2 lnc-JRKL-5:2