Transcript: lnc-KANTR-23:16

Basic information

LNCipedia transcript ID: lnc-KANTR-23:16 
LNCipedia gene ID: lnc-KANTR-23
Location (hg19): chrX:53123339-53173249
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 2423 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_110456
Alternative gene names: Spasm


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 98.4595 coding 
CPAT coding probability 87.82% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KANTR-23:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSPYL2-1:7
4.0 KANTR:7
4.1 KANTR:7
5.0 KANTR:7
5.1 lnc-TSR2-23:16
5.2 lnc-KANTR-23:16